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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46845383_46845495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46845383 - 46845495

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTATAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

CCTTCTATAAAT

Flanking Amino Acid:

KNKLKDLGVPGCWIYQSCFL

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

74.5

37.6

Major BPS

74.5

0.61

79.6

29.1

Major PPT

66.1

0.36

60.4

39.5

Minor 5ss

39.2

-1.2

2.9

49.4

46.6

Minor BPS

57.3

0.31

1.8

73.73

43.2

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026678

46844514 - 46876119

31606