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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46845712_46846178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46845712 - 46846178

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

GGTGTGGGATCT

Flanking Amino Acid:

RLVQEVKDLKNEVKALSEEK

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

74.4

0.55

68.4

42.1

Minor 5ss

32.9

-2

2.7

43.5

Minor BPS

32.1

-1.2

2.5

49.37

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036579

46844557 - 46872683

28127

ENSAPLT00000026678

46844514 - 46876119

31606

ENSAPLT00000020365

46844557 - 46872683

28127

ENSAPLT00000013748

46843698 - 46876119

32422

ENSAPLT00000045972

46844557 - 46872683

28127