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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46846278_46848004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46846278 - 46848004

Intron Length:

1727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACTAGTA

5'SS Class:

major

3'SS Sequence:

TTCTTTTGCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TGCTCCTGACAC

Flanking Amino Acid:

QAENQKLQVMNTSADPALGD

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

60.9

37.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

82.2

0.72

0.8

79.1

32.9

Minor 5ss

33.1

-1.9

3.6

44.3

45.3

Minor BPS

49.2

-0

1.9

61.41

43.4

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013748

46843698 - 46876119

32422

ENSAPLT00000045972

46844557 - 46872683

28127

ENSAPLT00000036579

46844557 - 46872683

28127

ENSAPLT00000026678

46844514 - 46876119

31606

ENSAPLT00000020365

46844557 - 46872683

28127