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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46849616_46850924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46849616 - 46850924

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTGTTATAATC

Flanking Amino Acid:

DQYNLLKVQLGKDNQHHNSH

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

70.4

0.46

0.9

62.2

39.2

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

56.4

0.18

1.7

70.1

35.9

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020365

46844557 - 46872683

28127

ENSAPLT00000013748

46843698 - 46876119

32422

ENSAPLT00000045972

46844557 - 46872683

28127

ENSAPLT00000036579

46844557 - 46872683

28127

ENSAPLT00000026678

46844514 - 46876119

31606