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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46853014_46853630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46853014 - 46853630

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTATTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTCCTCTTATTT

Flanking Amino Acid:

YNDNSLENYRKEKLKQLIEK

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

82.4

0.73

0.7

81.1

29.7

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

54.4

0.22

1.6

68.23

43.4

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045972

46844557 - 46872683

28127

ENSAPLT00000013748

46843698 - 46876119

32422

ENSAPLT00000036579

46844557 - 46872683

28127

ENSAPLT00000026678

46844514 - 46876119

31606

ENSAPLT00000020365

46844557 - 46872683

28127