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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46854521_46858003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46854521 - 46858003

Intron Length:

3483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

AGGATAGTAATG

Flanking Amino Acid:

LSQGDKIDRRGSKVQTRVGL

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

35.1

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

91.3

0.93

0.7

84.8

35.6

Minor 5ss

47.3

-0.3

2.5

60.3

44.3

Minor BPS

39.4

-0.9

2.1

39.81

37.9

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045972

46844557 - 46872683

28127

ENSAPLT00000026678

46844514 - 46876119

31606

ENSAPLT00000013748

46843698 - 46876119

32422