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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46870188_46875828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46870188 - 46875828

Intron Length:

5641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTTCTTTTATTT

Flanking Amino Acid:

EHLVRVLQTDRSDSEIIGYA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.6

37.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.7

0.89

0.7

84.8

28.7

Minor 5ss

34.4

-1.8

3.2

45.9

42.3

Minor BPS

0.3

1.5

73.36

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026678

46844514 - 46876119

31606

ENSAPLT00000013748

46843698 - 46876119

32422