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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46895509_46897445_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
46895509 - 46897445

Intron Length:
1937

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAC|GTAAGATGT

5'SS Class:
major

3'SS Sequence:
TTGATTATTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTGAT

U12 Branch Point Sequence:
ACTGCATAAAAT

Flanking Amino Acid:
SSTYYENHPVTNGIEEALEE

Intron Amino Acid Position:
182

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.8
0.58
1.3
72.5
39.9

Major BPS
87.6
0.93
0.8
77.4
37.3

Major PPT
75.7
0.58
0.9
70.8
39.6

Minor 5ss
41
-1
3.1
55.7
42.1

Minor BPS
46.1
-0.2
2.1
64.56
45.5

Associated Gene:

Gene:
G3BP2

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46881120 - 46906970
25851

46888156 - 46906336
18181

46881120 - 46906970
25851