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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47036914_47037377_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47036914 - 47037377

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGTGG

5'SS Class:

major

3'SS Sequence:

AACATGTGTATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

CCTGTTTCAACA

Flanking Amino Acid:

ICFVCLFCFQVCMLCSVGYH

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

52.2

47.1

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

57.2

0.16

1.1

49.9

Minor 5ss

40.3

-1.1

3.5

55.4

48.8

Minor BPS

49.6

-0

1.7

42.5

Associated Gene:

Gene:

PAQR3

Ensembl Gene ID:

ENSAPLG00000018923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023689

47035020 - 47037832

2813