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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47037541_47037647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47037541 - 47037647

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CTCCCCTTCATC

Flanking Amino Acid:

AYLPSRLCIKSLFILSNETV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.62

1.1

77.2

Major PPT

78.5

0.64

0.7

73.3

24.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

55.2

0.14

1.8

63.11

Associated Gene:

Gene:

PAQR3

Ensembl Gene ID:

ENSAPLG00000018923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023689

47035020 - 47037832

2813