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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47040987_47056786_F

Intron Information:

Intron Rank:

143417

Intron Class:

major

Intron Phase:

Intron Coordinates:

47040987 - 47056786

Intron Length:

15800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

TTGATCGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

56.3

0.19

2.1

71.36

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047451

47040819 - 47062110

21292

ENSAPLT00000041670

47040819 - 47058036

17218