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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47534137_47639727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47534137 - 47639727

Intron Length:

105591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TTGTATTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTCTTTGTATTT

Flanking Amino Acid:

EEANRDGKLSSIIYIRDYNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

86.8

0.83

0.8

84.8

35.4

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

47.4

-0.1

2.2

70.13

42.3

Associated Gene:

Gene:

CFAP299

Ensembl Gene ID:

ENSAPLG00000015021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038128

47533660 - 47669001

135342

ENSAPLT00000030607

47533660 - 47669087

135428

ENSAPLT00000015647

47505380 - 47669001

163622