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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47639871_47666152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47639871 - 47666152

Intron Length:

26282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGTC

5'SS Class:

major

3'SS Sequence:

CGCATTTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCCCTTAAAACT

Flanking Amino Acid:

KRLLPRKTDLSFYNWNKNVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

74.2

34.5

Major BPS

73.8

0.59

1.3

72.8

Major PPT

73.5

0.53

0.9

67.2

37.9

Minor 5ss

43.4

-0.7

3.1

61.2

43.7

Minor BPS

45.1

-0.2

1.9

60.99

43.3

Associated Gene:

Gene:

CFAP299

Ensembl Gene ID:

ENSAPLG00000015021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030607

47533660 - 47669087

135428

ENSAPLT00000015647

47505380 - 47669001

163622