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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47723791_47728769_R

Intron Information:

Intron Rank:

140619

Intron Class:

major

Intron Phase:

Intron Coordinates:

47723791 - 47728769

Intron Length:

4979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGATCATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTGCCTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

73.6

0.53

0.9

70.7

39.9

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

62.1

0.38

1.9

76.43

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040403

47723644 - 47729925

6282