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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47727844_47729774_F

Intron Information:

Intron Rank:

129396

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47727844 - 47729774

Intron Length:

1931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTCTTTG

5'SS Class:

weak_major

3'SS Sequence:

ATTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TAGTCCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.4

62.3

44.7

Major BPS

78.8

0.72

67.9

40.1

Major PPT

87.5

0.84

0.7

81.9

29.3

Minor 5ss

53.1

0.11

2.2

67.4

43.7

Minor BPS

69.7

0.7

1.6

81.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041952

47718466 - 47731989

13524