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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47877487_47878175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47877487 - 47878175

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTAGGTTTAACG

Flanking Amino Acid:

LLTIPVFSDDALYLASYESE

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.7

0.6

69.8

40.3

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

49.8

-0.1

1.9

56.48

Associated Gene:

Gene:

RASGEF1B

Ensembl Gene ID:

ENSAPLG00000015111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025907

47737437 - 47880095

142659

ENSAPLT00000019696

47855827 - 47878282

22456

ENSAPLT00000015770

47820565 - 47878282

57718

ENSAPLT00000028629

47851299 - 47879839

28541