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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47916918_47918193_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
47916918 - 47918193

Intron Length:
1276

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAACCTC

5'SS Class:
major

3'SS Sequence:
TGTTTTCTGGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
TGGCTTTGCATT

Flanking Amino Acid:
RQEQYRSFLRSVSLLKNLPE

Intron Amino Acid Position:
313

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
69.5
41.5

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
75.8
0.58
1
73.9
36.8

Minor 5ss
41.8
-0.9
3.2
59.1
45.6

Minor BPS
43.6
-0.4
1.8
58.07
39.5

Associated Gene:

Gene:
PRKG2

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

47906770 - 47933892
27123

47904153 - 47932305
28153