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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47970499_47971478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47970499 - 47971478

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTACCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

CATCTTGTACCT

Flanking Amino Acid:

LGRLLDGVTEDERLGRDNEI

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

68.7

0.42

66.3

40.6

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

43.7

-0.4

2.1

61.25

43.1

Associated Gene:

Gene:

PKD2

Ensembl Gene ID:

ENSAPLG00000002737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002806

47970265 - 47980193

9929