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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47972197_47972416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47972197 - 47972416

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCTTA

5'SS Class:

major

3'SS Sequence:

TGTTGCCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTGCCCTAAAG

Flanking Amino Acid:

QMRDDLEKEREDLDLDRSSL

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

71.1

37.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

65.9

0.36

1.1

64.4

37.1

Minor 5ss

41.5

-0.9

47.1

48.3

Minor BPS

51.6

-0

62.49

44.7

Associated Gene:

Gene:

PKD2

Ensembl Gene ID:

ENSAPLG00000002737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002806

47970265 - 47980193

9929