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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47972535_47972893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47972535 - 47972893

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTGTTTTTATT

Flanking Amino Acid:

NFDELRQDLKGKGHTDAEIE

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.2

0.79

0.7

84.8

Minor 5ss

31.2

-2.2

3.1

31.4

42.6

Minor BPS

52.2

0.15

1.7

70.14

41.8

Associated Gene:

Gene:

PKD2

Ensembl Gene ID:

ENSAPLG00000002737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002806

47970265 - 47980193

9929