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Intron Name: Anas_platyrhynchos_platyrhynchos_4_47973016_47974014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47973016 - 47974014

Intron Length:

999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

AAAACGTGAAAT

Flanking Amino Acid:

EMELSDLIRKGYNKAMVKLK

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.6

30.5

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

33.4

-1.9

3.6

46.9

48.4

Minor BPS

-0.3

2.2

60.25

Associated Gene:

Gene:

PKD2

Ensembl Gene ID:

ENSAPLG00000002737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002806

47970265 - 47980193

9929