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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48028752_48029763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48028752 - 48029763

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGACTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAC

U12 Branch Point Sequence:

CTCTCTGTGACT

Flanking Amino Acid:

SVYSMEPVDEVKTTGSSYGA

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

0.27

1.2

55.4

41.7

Major PPT

68.6

0.42

1.1

61.2

44.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

54.4

0.22

2.1

74.17

43.6

Associated Gene:

Gene:

SPARCL1

Ensembl Gene ID:

ENSAPLG00000003209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003262

48023336 - 48035707

12372