Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_48070737_48072833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48070737 - 48072833

Intron Length:

2097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACAGTC

5'SS Class:

major

3'SS Sequence:

CTTTTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TTTTTCTCACAG

Flanking Amino Acid:

AGELCDVTLKVGTKLISCHK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

69.4

35.7

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

0.86

0.6

83.5

24.8

Minor 5ss

35.1

-1.7

3.5

49.9

46.6

Minor BPS

49.9

-0.1

64.47

43.3

Associated Gene:

Gene:

KLHL8

Ensembl Gene ID:

ENSAPLG00000003622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003713

48070530 - 48082400

11871