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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4808508_4809292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4808508 - 4809292

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

TTGTACATAATC

Flanking Amino Acid:

WIFQWLFLRYKSIVGRRFFF

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

82.9

0.74

0.7

80.1

25.3

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

59.3

0.27

1.8

72.42

38.6

Associated Gene:

Gene:

SGMS2

Ensembl Gene ID:

ENSAPLG00000007057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007329

4785137 - 4814100

28964

ENSAPLT00000038135

4807851 - 4814100

6250

ENSAPLT00000018469

4807851 - 4814570

6720