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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4809411_4810294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4809411 - 4810294

Intron Length:

884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTGGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTGTTTTACT

Flanking Amino Acid:

PGMHFQCAPKLNGDSQAKLQ

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

66.1

0.36

1.1

58.1

47.3

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

63.9

0.52

2.1

87.77

37.8

Associated Gene:

Gene:

SGMS2

Ensembl Gene ID:

ENSAPLG00000007057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038135

4807851 - 4814100

6250

ENSAPLT00000018469

4807851 - 4814570

6720

ENSAPLT00000007329

4785137 - 4814100

28964