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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48096320_48097309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48096320 - 48097309

Intron Length:

990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GCCCCCAATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAT

U12 Branch Point Sequence:

CTGCCCCCAATT

Flanking Amino Acid:

KPRRPQVKFEKQHSMEYHIE

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

48.8

-0

1.3

56.3

37.4

Major PPT

63.2

0.3

58.7

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

48.1

-0

1.9

66.46

44.3

Associated Gene:

Gene:

AFF1

Ensembl Gene ID:

ENSAPLG00000004059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004237

48090922 - 48136073

45152