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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48097402_48098440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48097402 - 48098440

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTATC

5'SS Class:

major

3'SS Sequence:

TGTGGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

ATGTCTCTAACC

Flanking Amino Acid:

KHSEQVKGNKGSAGDVTNPF

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

35.3

Major BPS

72.3

0.55

73.3

28.9

Major PPT

80.5

0.69

0.9

76.9

42.1

Minor 5ss

40.6

-1

3.1

54.1

37.3

Minor BPS

64.6

0.44

1.7

73.4

37.5

Associated Gene:

Gene:

AFF1

Ensembl Gene ID:

ENSAPLG00000004059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004237

48090922 - 48136073

45152