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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48098691_48101810_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48098691 - 48101810

Intron Length:

3120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGATGTGT

5'SS Class:

weak_major

3'SS Sequence:

TTCCCATCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

AATTGCAAAATT

Flanking Amino Acid:

GGEGGFVQGLQAPKASFETQ

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.1

53.4

40.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

74.6

0.55

0.8

66.5

34.6

Minor 5ss

35.3

-1.7

3.4

52.1

45.8

Minor BPS

-0.2

2.2

68.38

42.6

Associated Gene:

Gene:

AFF1

Ensembl Gene ID:

ENSAPLG00000004059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004237

48090922 - 48136073

45152