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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4810449_4811018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4810449 - 4811018

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

TTCTGCTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TTCTGCTTTATA

Flanking Amino Acid:

LTLIYLFIKELLLGVGRVRN

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

34.4

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

81.5

0.71

0.8

76.3

32.5

Minor 5ss

43.9

-0.7

2.9

45.5

Minor BPS

55.4

0.16

2.1

70.75

41.8

Associated Gene:

Gene:

SGMS2

Ensembl Gene ID:

ENSAPLG00000007057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038135

4807851 - 4814100

6250