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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4810449_4812904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4810449 - 4812904

Intron Length:

2456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

CCTGTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTCCCTTTACCT

Flanking Amino Acid:

LTLIYLFIKEYSPRHFWWYH

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

34.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

82.1

0.72

0.8

75.6

Minor 5ss

43.9

-0.7

2.9

45.5

Minor BPS

65.5

0.56

1.6

80.9

41.2

Associated Gene:

Gene:

SGMS2

Ensembl Gene ID:

ENSAPLG00000007057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018469

4807851 - 4814570

6720

ENSAPLT00000007329

4785137 - 4814100

28964