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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48105185_48113716_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48105185 - 48113716

Intron Length:

8532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGTGCATT

5'SS Class:

weak_major

3'SS Sequence:

GGTGGCCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGCTTTCTAATT

Flanking Amino Acid:

FDVLKTAFQLAALQSQPESV

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.3

61.4

44.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

67.6

0.4

58.3

43.1

Minor 5ss

46.9

-0.3

2.8

61.2

43.8

Minor BPS

56.5

0.28

1.6

72.39

39.2

Associated Gene:

Gene:

AFF1

Ensembl Gene ID:

ENSAPLG00000004059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004237

48090922 - 48136073

45152