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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48113902_48130965_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48113902 - 48130965

Intron Length:

17064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCAAGTATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

TTAAGCTTAAAA

Flanking Amino Acid:

KLKIPAEPIEQKYPNPLFSI

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

0.2

1.1

55.4

43.4

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

57.6

0.23

1.9

70.66

40.9

Associated Gene:

Gene:

AFF1

Ensembl Gene ID:

ENSAPLG00000004059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004237

48090922 - 48136073

45152