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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48114998_48130945_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48114998 - 48130945

Intron Length:

15948

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTTGGCTG

5'SS Class:

weak_major

3'SS Sequence:

AAACCTTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCAAA

U12 Branch Point Sequence:

TTTGTTGTAGCA

Flanking Amino Acid:

EPIEVSAVVGGDVQCVEEIL

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.4

50.3

46.3

Major BPS

47.9

-0.1

1.3

54.7

Major PPT

64.7

0.33

0.9

54.9

40.2

Minor 5ss

-2.8

31.2

42.6

Minor BPS

46.6

-0.2

2.2

65.92

41.4

Associated Gene:

Gene:

AFF1

Ensembl Gene ID:

ENSAPLG00000004059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031832

48110906 - 48132421

21516