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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4813072_4813896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4813072 - 4813896

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTCTCCTTACCT

Flanking Amino Acid:

WWYHSMANEKTLKVSSQTNF

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

77.5

32.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

76.6

0.6

70.6

39.1

Minor 5ss

29.1

-2.4

2.8

34.7

41.7

Minor BPS

78.3

0.97

1.6

91.7

38.1

Associated Gene:

Gene:

SGMS2

Ensembl Gene ID:

ENSAPLG00000007057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038135

4807851 - 4814100

6250

ENSAPLT00000018469

4807851 - 4814570

6720

ENSAPLT00000007329

4785137 - 4814100

28964