Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_484087_484997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

484087 - 484997

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTATTTTGACA

Flanking Amino Acid:

RKEHYSIYSKDDIWVVSKTL

Intron Amino Acid Position:

1345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.5

0.6

72.8

41.7

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

65.6

0.48

1.2

72.57

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013744

474056 - 496680

22625