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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4841413_4846081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4841413 - 4846081

Intron Length:

4669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGCAC

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

LFKRLDKFAPEHTIFASNTS

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

67.8

37.5

Major BPS

47.8

-0.1

1.4

57.5

39.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

43.6

-0.7

3.1

53.6

44.8

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

HADH

Ensembl Gene ID:

ENSAPLG00000007402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007695

4837044 - 4855584

18541