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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48487567_48500303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48487567 - 48500303

Intron Length:

12737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

TCCAACCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAA

U12 Branch Point Sequence:

TGTATTCCAACC

Flanking Amino Acid:

FDCGEKPSFDSNTDVHTVAS

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

59.3

0.23

1.2

70.5

35.7

Major PPT

61.8

0.27

54.8

34.8

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

46.7

-0.2

1.8

60.65

38.2

Associated Gene:

Gene:

ARHGAP24

Ensembl Gene ID:

ENSAPLG00000006223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043560

48480576 - 48621357

140782

ENSAPLT00000026704

48480576 - 48511207

30632

ENSAPLT00000006443

48480576 - 48621357

140782