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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4849391_4850799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4849391 - 4850799

Intron Length:

1409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTTTTGTTAATT

Flanking Amino Acid:

AVGKSPVSCKDTPGFIVNRL

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.7

1.05

0.6

92.2

16.3

Major BPS

84.4

0.85

34.5

Major PPT

76.9

0.61

0.9

72.7

37.2

Minor 5ss

33.9

-1.8

2.8

41.8

44.8

Minor BPS

0.52

2.1

82.74

39.5

Associated Gene:

Gene:

HADH

Ensembl Gene ID:

ENSAPLG00000007402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023176

4837044 - 4855584

18541

ENSAPLT00000007695

4837044 - 4855584

18541