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Intron Name: Anas_platyrhynchos_platyrhynchos_4_486613_487163_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

486613 - 487163

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATGTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TGCTCTTTTATT

Flanking Amino Acid:

YKQIFKAALTEHLNIMLFEL

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

69.3

0.44

1.1

68.3

41.6

Minor 5ss

43.9

-0.7

2.8

58.4

46.1

Minor BPS

62.8

0.48

1.6

76.17

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013744

474056 - 496680

22625