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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48699563_48700024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48699563 - 48700024

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATTAC

U12 Branch Point Sequence:

CAGGACTGACTT

Flanking Amino Acid:

DQIDGIVHFETREALPTWDK

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

63.4

43.8

Major BPS

49.7

-0

1.2

43.7

38.9

Major PPT

91.4

0.93

0.6

87.5

22.7

Minor 5ss

40.9

-1

2.8

45.8

43.4

Minor BPS

40.9

-0.6

1.8

50.4

43.7

Associated Gene:

Gene:

COPS4

Ensembl Gene ID:

ENSAPLG00000009737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010153

48698988 - 48706193

7206