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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48702582_48703686_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48702582 - 48703686

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTATAA

5'SS Class:

weak_major

3'SS Sequence:

ATTTTCTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

TTTTCTGTTACT

Flanking Amino Acid:

TNEQLQIHYKVCYARVLDYR

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.2

58.8

36.4

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

80.7

0.69

0.8

74.1

Minor 5ss

32.3

-2

3.1

39.1

46.1

Minor BPS

60.2

0.4

2.3

87.77

37.8

Associated Gene:

Gene:

COPS4

Ensembl Gene ID:

ENSAPLG00000009737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010153

48698988 - 48706193

7206