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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48704667_48705992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48704667 - 48705992

Intron Length:

1326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TATTATTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTGCTAGTGACT

Flanking Amino Acid:

QPRVISFEEQVASIRQHLAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

84.7

0.86

74.3

40.7

Major PPT

68.9

0.43

62.3

43.7

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

45.6

-0.2

2.2

69.13

41.9

Associated Gene:

Gene:

COPS4

Ensembl Gene ID:

ENSAPLG00000009737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010153

48698988 - 48706193

7206