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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48721328_48733513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48721328 - 48733513

Intron Length:

12186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGA

5'SS Class:

major

3'SS Sequence:

ATTGGCTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

ATTGGCTTAATA

Flanking Amino Acid:

LQTQQLKTVQAVKSAVQTIT

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

38.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

64.8

0.33

59.2

41.3

Minor 5ss

35.4

-1.7

3.3

47.1

48.3

Minor BPS

62.4

0.39

1.9

73.28

39.2

Associated Gene:

Gene:

LIN54

Ensembl Gene ID:

ENSAPLG00000009904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010336

48720635 - 48740328

19694