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Intron Name: Anas_platyrhynchos_platyrhynchos_4_487303_488321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

487303 - 488321

Intron Length:

1019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATT

Flanking Amino Acid:

SCHTVTGDVQEITVSELSFP

Intron Amino Acid Position:

1128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

79.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

36.7

-1.5

2.6

44.4

43.7

Minor BPS

78.6

0.98

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013744

474056 - 496680

22625