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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48733731_48734460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48733731 - 48734460

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TATGTCTTGATT

Flanking Amino Acid:

PSTNTQPLQQAKPVVVNATP

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

84.4

0.85

34.5

Major PPT

76.4

0.59

69.7

40.3

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

0.62

1.3

78.98

37.7

Associated Gene:

Gene:

LIN54

Ensembl Gene ID:

ENSAPLG00000009904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010336

48720635 - 48740328

19694