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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48738366_48738663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48738366 - 48738663

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTACAT

U12 Branch Point Sequence:

TCTGCCTTGACA

Flanking Amino Acid:

HENDRQKAIKACLDRNPEAF

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

57.8

0.2

1.1

66.6

38.6

Major PPT

72.7

0.51

68.2

37.5

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

74.5

0.77

1.3

78.22

38.8

Associated Gene:

Gene:

LIN54

Ensembl Gene ID:

ENSAPLG00000009904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010336

48720635 - 48740328

19694