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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48744649_48746585_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48744649 - 48746585

Intron Length:

1937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGAGGAT

U12 Branch Point Sequence:

ATGGCTGTAGCC

Flanking Amino Acid:

KSCATFSSSHRYHKLIWGPH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

68.4

38.7

Major BPS

44.4

-0.3

1.4

37.2

42.1

Major PPT

79.5

0.66

0.9

72.9

37.4

Minor 5ss

32.7

-2

45.6

Minor BPS

44.2

-0.4

2.2

55.88

43.1

Associated Gene:

Gene:

SEC31A

Ensembl Gene ID:

ENSAPLG00000010192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010704

48744081 - 48777718

33638