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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48746785_48747724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48746785 - 48747724

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTTT

5'SS Class:

major

3'SS Sequence:

ATGTGTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTCTGTTAATG

Flanking Amino Acid:

VRALDVNMFQTNLVASGANE

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.2

79.9

Major BPS

84.4

0.85

34.5

Major PPT

76.8

0.6

69.3

41.3

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

50.6

-0.1

2.1

60.97

41.3

Associated Gene:

Gene:

SEC31A

Ensembl Gene ID:

ENSAPLG00000010192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010704

48744081 - 48777718

33638