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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48747821_48748661_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48747821 - 48748661

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGCCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

AAGGGTGTGACA

Flanking Amino Acid:

TPMTPGVKTQPLEDISCIAW

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

75.3

34.7

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

60.9

0.25

1.1

55.1

41.4

Minor 5ss

-2.2

3.6

46.7

48.6

Minor BPS

38.4

-0.9

2.2

44.14

38.9

Associated Gene:

Gene:

SEC31A

Ensembl Gene ID:

ENSAPLG00000010192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010704

48744081 - 48777718

33638