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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48753530_48756491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48753530 - 48756491

Intron Length:

2962

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCTGGTGGC

5'SS Class:

major

3'SS Sequence:

CTCTCTGCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATTT

Flanking Amino Acid:

GSWACVKCFAAPTESDASLL

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.4

64.1

41.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

66.7

0.38

1.1

67.1

Minor 5ss

18.2

-3.7

3.7

27.2

36.6

Minor BPS

56.7

0.29

1.6

70.13

42.3

Associated Gene:

Gene:

SEC31A

Ensembl Gene ID:

ENSAPLG00000010192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010704

48744081 - 48777718

33638